PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95383.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 279aa    MW: 30787.6 Da    PI: 8.0677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-0974120251
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 
                 r+ h+ +Er RR+ +++ f  L  llP+a   +  + + ++iL + ++YI
  RWR95383.1  74 RERHKLAERERRKSMRELFLSLHALLPHA---NTVRKEQSAILDEIIKYI 120
                 899**************************...99***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MLPTVHRVQL RQPSSHVTNK PQSNQIKTQE AEAEAEEEEE EMTIEWSEWD SIPASESKSG  60
GGSAASGGGC VDARERHKLA ERERRKSMRE LFLSLHALLP HANTVRKEQS AILDEIIKYI  120
PLAAARLRSL KTRRELPPGQ PPHDSTRSGT APAVHVSERS SASSNSSDCD IRVAPEPSSS  180
VAIRVRGDRV NVSLTDTKGT SQALLLSAVL DELEAHHLDL VRSTHCRDGS KLLHHSESKI  240
SDGLDRSPAL LKARLQDLAC KLHKLRKSSS LKRTFDQMD