PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95390.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family LBD
Protein Properties Length: 219aa    MW: 24235.2 Da    PI: 5.4581
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.84.2e-397105198
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++C++apyf+ ++ + +fa++hk+FGasnv+kll++lp + r++a+ ++ yeA+ar+rdP+yG+v++i++lqqq+++l+ e++ l 
  RWR95390.1   7 SCGACKFLRRKCTNGCIFAPYFCYDEgATHFAAIHKVFGASNVSKLLSHLPMHSRSEAAITISYEAQARIRDPIYGCVAHIFALQQQVANLQGEIDFLA 105
                 6***********************9989****************************************************************9998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MAGHGTSCGA CKFLRRKCTN GCIFAPYFCY DEGATHFAAI HKVFGASNVS KLLSHLPMHS  60
RSEAAITISY EAQARIRDPI YGCVAHIFAL QQQVANLQGE IDFLAMQTQT TQPVANAVNY  120
ESIQPINNFC DFQLSPQKGA ENLFDSVNQN IILDPDSNRA SIGGVGHQIP SLDREVTDSW  180
ELHDIVNGPN FSEKVTLDVM EHAILPNDTW FNNAIYPQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.16e-57LBD family protein