PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95430.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Dof
Protein Properties Length: 319aa    MW: 34294.1 Da    PI: 9.2265
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.38.3e-3965124362
      zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 e alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nkks+
  RWR95430.1  65 EPALKCPRCNSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSK 124
                 6789*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVFSSAPTYL DPNNWQQQHN HQQGSSSENP QLTQPMPPPG AGVACAIRPN SMAERARLAK  60
VPPPEPALKC PRCNSTNTKF CYFNNYSLTQ PRHFCKTCRR YWTRGGALRN VPVGGGCRRN  120
KKSKGSSSKS PASSDQQTSG GSTGAVSSSS FAAEVISRIP PLLPSQLPFM SSLGYGASDM  180
GFNYNGIQMA GGGSEMEFQI GSNQTSFGSM LSSGIEQWRL QQPLQQSPYL SGLEPPSGLY  240
PLEGERVETS FGIGGAGLIR SRLQSSSGPN QQASVKSEGN QGLNSSRQFL GIQGNDQYLD  300
GNTWTDFSNF TSSSNTHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.38e-44Dof family protein