PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95466.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 252aa MW: 29226.9 Da PI: 6.8506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l++ v lG ++W+ Ia+ g++Rt+k+c++rw +yl RWR95466.1 8 KGPWTEQEDLRLICFVGVLGERRWDFIAKVSGLNRTGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	54.7	2.4e-17	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ RWR95466.1 61 RGRMTPQEERLVLELHSRWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MVQEETRKGP WTEQEDLRLI CFVGVLGERR WDFIAKVSGL NRTGKSCRLR WVNYLHPGLK 60 RGRMTPQEER LVLELHSRWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QERKRTQSPS 120 SSSSLTSSSS SNCLSQTQDD PPVGSMHEFE IEKSLMMSDD KGSCASHTIQ GEESEKESTN 180 GYSMEQIWKE IDSSSEVTDG AINDCCNFSC PSMPSPVWDF RYDLPWKMDE EELKIWLPMG 240 EFCCPIHHGR ES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	3e-79	MYB family protein