PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95627.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YC
Protein Properties Length: 142aa    MW: 15950.5 Da    PI: 9.9574
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC43.95.1e-1413931998
       NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivpr 98
                 ++Pl r++ki+k d+++ ++ +ea  l+s + +lf+  lt +s   a ++kr+t+k   i  a +r   + dfl+d  p 
  RWR95627.1 13 SAFPLGRVRKIVKLDKEIIRVNSEALFLISLSTDLFLHFLTEKSMQVALDKKRKTIKTDHIRIAAKRHpPTADFLLDSLPM 93
                579**********************************************************98887752799*****9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MEEGKEEEPI LCSAFPLGRV RKIVKLDKEI IRVNSEALFL ISLSTDLFLH FLTEKSMQVA  60
LDKKRKTIKT DHIRIAAKRH PPTADFLLDS LPMPSQPPVR PSSDQTKPSS SHGDEKPLPP  120
GVRRIEQFFH KSAGYGSQIA HA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.17e-43NF-YC family protein