PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95667.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 546aa MW: 59054.6 Da PI: 7.5883

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.8e-09	343	380	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ qV++WF N R + RWR95667.1 343 FEHflHPYPSDADKHLLARQTGLSRIQVSNWFINARVR 380 664559******************************88 PP
2	BELL	122.7	1.5e-39	203	273	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q++kakL ++l+eVd+rY++y+eq+q+v++sF+ v+g+g+a+pYt+lA+ka+SrhFrcLkdaia q+ RWR95667.1 203 RFEHQRRKAKLSTMLDEVDRRYNHYCEQMQMVVNSFDSVMGYGAATPYTALAQKAMSRHFRCLKDAIAAQL 273 779*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MLLPNPSSSL HAFHTPQSAG TVIGNSPIPP PSSQFTWTAG AGGENSNKIG IPESQGLSLS 60 LSSSLQQLEA AKGDELRMGD GVFYYNQGAG AASSSSTYPL KNLGNHPIHF QGGGVHNNLQ 120 AHVGFGSLGV VNVLRNSKYA KPAQQLLEEF CSVGRGQLKS TRHGKHSSNT NPNSSAPSSS 180 GAAGVGGSSS ASKDPTSLSP ADRFEHQRRK AKLSTMLDEV DRRYNHYCEQ MQMVVNSFDS 240 VMGYGAATPY TALAQKAMSR HFRCLKDAIA AQLKLTCELL GEKDAAGTSG ITKGETPRLR 300 LLEQSLRQQR AFHQMGGMME QEAWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLA 360 RQTGLSRIQV SNWFINARVR LWKPMVEEMY QQEAKEDEEE ERDGDEGKSD HNHSQRAQTP 420 TTTAAAAATT AAGKRSEINA QEKDPSHNAI NGHLFSENQA NGIFIDHSVV GHNPMATIHQ 480 HTDPCGSIDD DHSCLNSIGT TGNGAPVGPN QVRFGTTGDV SLTLGLRHAG NMPEKGRFSV 540 REYGGC

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MLLPNPSSSL HAFHTPQSAG TVIGNSPIPP PSSQFTWTAG AGGENSNKIG IPESQGLSLS  60
LSSSLQQLEA AKGDELRMGD GVFYYNQGAG AASSSSTYPL KNLGNHPIHF QGGGVHNNLQ  120
AHVGFGSLGV VNVLRNSKYA KPAQQLLEEF CSVGRGQLKS TRHGKHSSNT NPNSSAPSSS  180
GAAGVGGSSS ASKDPTSLSP ADRFEHQRRK AKLSTMLDEV DRRYNHYCEQ MQMVVNSFDS  240
VMGYGAATPY TALAQKAMSR HFRCLKDAIA AQLKLTCELL GEKDAAGTSG ITKGETPRLR  300
LLEQSLRQQR AFHQMGGMME QEAWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLA  360
RQTGLSRIQV SNWFINARVR LWKPMVEEMY QQEAKEDEEE ERDGDEGKSD HNHSQRAQTP  420
TTTAAAAATT AAGKRSEINA QEKDPSHNAI NGHLFSENQA NGIFIDHSVV GHNPMATIHQ  480
HTDPCGSIDD DHSCLNSIGT TGNGAPVGPN QVRFGTTGDV SLTLGLRHAG NMPEKGRFSV  540
REYGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-121	TALE family protein