PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95774.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 261aa    MW: 29318.6 Da    PI: 6.5073
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.5e-1277129155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +++ hn+ Er RR ++N  ++ Lr++lP  +   p+kKls  ++  +  +YI +Lq
  RWR95774.1  77 KKKYHNASERDRRMKMNVLYSSLRSMLPGiD---PAKKLSIPATISLILKYIPELQ 129
                 6788*************************99...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MLALSPPCFS SFGFPSDDEM GHEQLLHWAV DNSFMPSADT VTDLSGSFLQ YSFQPQLPIA  60
DFNHSSPATG DDKLNVKKKY HNASERDRRM KMNVLYSSLR SMLPGIDPAK KLSIPATISL  120
ILKYIPELQK EVDGLMRRKE EMELKMSRAS SMPGDVTVTP QENATSFPTV SARHIGDREV  180
FIQICTTTWG SSPVSKALEK MEEEGFHLLH ASSFTTAGNK VFYNLHLQVF DGQRMMECGM  240
LRKKLLCCME TMKDSVSCEQ T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-41bHLH family protein