PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95895.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family M-type_MADS
Protein Properties Length: 165aa    MW: 18642.4 Da    PI: 9.99
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.65.1e-211157349
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 e  s rq+t+skR++g+ KKA ELSvLCd++va+++fs+ gk   y
  RWR95895.1 11 LETASARQITYSKRKAGLAKKAMELSVLCDINVALVMFSPAGKPTSY 57
                677899************************************96555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MGRMKIKIRR LETASARQIT YSKRKAGLAK KAMELSVLCD INVALVMFSP AGKPTSYIGG  60
NNYWTNPDEV ETYPETVVME ECLVESLNRL QKRKTQNCAW PPGQYFPRLN GRSQVDQKLV  120
MNLRDFSGHG NARGAAENVK TPFFNHARLL NSMGPSYEAH PENHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.12e-21M-type_MADS family protein