PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95904.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 232aa MW: 26487.9 Da PI: 8.322

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.8e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+++++ +G ++W ++++ g++R +k+c++rw++yl RWR95904.1 15 KGAWTAEEDEKLIKCIEIYGERRWQSVPSQAGLNRNGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	53.8	4.5e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Iar+++ gRt++++k++w+++l RWR95904.1 68 RGNISDQEEDLIIRLHKLLGNR-WSLIARRLP-GRTDNEIKNYWNSHL 113 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MAPTKEKSAK VAVNKGAWTA EEDEKLIKCI EIYGERRWQS VPSQAGLNRN GKSCRLRWLN 60 YLRPNIKRGN ISDQEEDLII RLHKLLGNRW SLIARRLPGR TDNEIKNYWN SHLSKKINKP 120 NEKKGPKSHK SRKSLQGNGG LSENGPSIKE DEHQRDEFDV EEFFDFSRDG VVGGLFGSSV 180 EQPMERFDGF VSKKGSFSME WVRDFLDVEE VLCGFPCIEG IGEEINNPVP PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	1e-50	MYB family protein