PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95905.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 273aa MW: 30712.6 Da PI: 7.139

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k++G g W++ +++ g++R++k+c++rw++yl RWR95905.1 14 RGAWTAAEDKILSDYIKMHGEGKWRSLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.2	6.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + eE+el+++++k+lG++ W++Ia +++ gRt++++k++w++ RWR95905.1 67 RGNISHEEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999***************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGRSPCCAKE GLNRGAWTAA EDKILSDYIK MHGEGKWRSL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SHEEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVKNQS 120 SQPSNNKQIQ KKPEVEPPPI KPNVNVIRTK ALRCTKVFIT TPPHQKVDNP SKNAIAESSS 180 GGETDTQMRT GQVSSQTHQD DDSSMNLDVG ELCLSELLTS DYLQGHDTDG IVGEPYLFNH 240 EMMEDWSLGD CDQIGVGLDL QSFLDSEADW LGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	7e-64	MYB family protein