PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95907.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 283aa MW: 31574.3 Da PI: 7.6212

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4.2e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ll+ ++k +G g W + +++ g++R++k+c++rw++yl RWR95907.1 15 KGAWTALEDKLLISYIKTHGVGKWGSLPKKAGLKRCGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.6e-17	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+el+++++++lG++ W++Ia +++ gRt++++k++w++ RWR95907.1 68 RGNITQDEEELIIRLHNLLGNK-WSLIAGRIP-GRTDNEIKNYWNTT 112 7999****************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MDRRRSSCSE DGLKKGAWTA LEDKLLISYI KTHGVGKWGS LPKKAGLKRC GKSCRLRWLN 60 YLRPDIKRGN ITQDEEELII RLHNLLGNKW SLIAGRIPGR TDNEIKNYWN TTLAKKLKAG 120 PPKSSIGNGP ICQFEEKNIV IGPAPPQKVQ ANVIRTKALR CTRPTVLPLH MFSSLDCNND 180 QAMDIQTHMD PQIIDGALKF SNDFMMGFNK EEGGEAEQVY MGCPPNTSFC PEIQVENGMT 240 GASILFEEAM VIDNLVMNGC DLQNIGSAVG SWSCFLDAEE EWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-58	MYB family protein