PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95992.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 284aa MW: 32501.9 Da PI: 5.9879

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.6	3.8e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l++ + G +W+++++ g+ R++k+c++rw +yl RWR95992.1 14 KGPWTAEEDRKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.5	2.4e-16	71	111	5	47
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++ +d+++qlG++ W++Ia+ ++ gRt++++k++w++y RWR95992.1 71 SDSEEKMVIDLHAQLGNR-WSKIAAQLP-GRTDNEIKNHWNTY 111 788*************.*****.**********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MGRQPCCEKV GLKKGPWTAE EDRKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDSEEKMVID LHAQLGNRWS KIAAQLPGRT DNEIKNHWNT YIKKKLKKMG 120 IDPLTHKPIS PPTQHQQNPI SSTIVSVAGV DEKKSSEIFI QTAISETREE EKFYTNDSDT 180 AKSDVFCTDE VPLIHPQEIL VPCDSTTTMS TSSSSVSDSF VRPEEFNFSS MEWPESMYLW 240 EMDELNGWDL MYGDGERKLV SDPISSFHQK ATAFDQDPWK FELF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16600.1	1e-92	MYB family protein