PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96050.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 261aa MW: 30149.1 Da PI: 9.1077

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.2	2.2e-19	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++v +G g+W+++ar g++R +k+c++rw +yl RWR96050.1 16 KGPWTAEEDKLLIEYVSTHGEGRWNSVARLAGLRRNGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ RWR96050.1 69 RGQITPHEENIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MAGPLGWGIV EGGWRKGPWT AEEDKLLIEY VSTHGEGRWN SVARLAGLRR NGKSCRLRWV 60 NYLRPDLKRG QITPHEENII LELHARWGNR WSTIARSLPG RTDNEIKNYW RTHFKKAEKP 120 SQTPGKPKSR AQRRQQQQKK RQPPPQHQLQ EQQQQQQFDM KKIMSPLEED DYRLPSMVPS 180 RPEMVFLCPP SEEQVLYSMI HGDSSMPEAS CEEGLWGGLW DFYDLHADLD FANTCATGKA 240 MGQNQVTSIY PGYFNQLTSS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	8e-73	MYB family protein