PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96079.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 228aa    MW: 25760.9 Da    PI: 6.8725
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.44.1e-18155188134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C + kTp+WR gp g+ktLCnaCG++y+  +
  RWR96079.1 155 CRHCMAEKTPQWRAGPLGPKTLCNACGVRYKAGR 188
                 *******************************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDPFEEALCI FEDFLSFPSD LDDLNPKDEQ QQHQDQKYQK HLQNSSKMNT QLSVLNSSED  60
SFPVLEGEEE EEEELEWLKE EFPPLEPFIV GGAESPKHHS PVSVLENGVW SSGFRVPVRA  120
RSRTQRRRRV GAPGLFGVWG GGGDGKSGAA EARRCRHCMA EKTPQWRAGP LGPKTLCNAC  180
GVRYKAGRLV PEYRPASSPT FSIEMHSNSH RKIIEMRKKR QQKALENG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.17e-39GATA family protein