PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96332.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Trihelix

Protein Properties

Length: 291aa MW: 32422.5 Da PI: 9.9438

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.3	5.3e-15	22	113	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +W++ + +Li+a ++ +l+rg+l++++W++v++++ + ++ +r+ +qCk++++ l+k+yk +k+ ++ s++p+f++l+ RWR96332.1 22 CWSEGATSTLIDAWGDRYLDLNRGNLRQKHWQDVADAVnsrdgAGKKPRRTDVQCKNRIDTLKKKYKLEKAKIAAVpDGTVASQWPFFSRLD 113 7***********************************999887788899*****************999986678899*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDGRETALRR PSYHALPSRE DCWSEGATST LIDAWGDRYL DLNRGNLRQK HWQDVADAVN 60 SRDGAGKKPR RTDVQCKNRI DTLKKKYKLE KAKIAAVPDG TVASQWPFFS RLDDLIGPAA 120 ALKKPSPPLA LPLPYRKTPP PLPQAAAVRP SKDKRPAVAV DDSFFRRNYS AAAAAAAAAV 180 DADSGSSRSS TESRRRVREE EDGGGGNGDG DGLHQLAQAI ERFAEVYERV EDAKQRQLLE 240 LEKERMEFAK GLEFQRMQLF MDWQIQLEKV KRAKRSSAAA GEHNLLPSLP F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	2e-35	Trihelix family protein