PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96387.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 242aa    MW: 27070.5 Da    PI: 6.3155
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18103154256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr ++ +g+++AeIrd +    + +r++lg+f taeeAa a+++a+ +++g+
  RWR96387.1 103 HYRGVRCRP-WGKFAAEIRDSTR---HgARVWLGTFNTAEEAAMAYDKAAFSMRGA 154
                 8*****999.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEKIYYNTIH KSSIEGRKQP RRPKEEEEEE EDMAPFLEAL NPSSTTESEL PLNENDSQDM  60
VLCEVLNEAM SMNSSNNNKC SQAKGPIQKH KGMETRRTIG KKHYRGVRCR PWGKFAAEIR  120
DSTRHGARVW LGTFNTAEEA AMAYDKAAFS MRGAKALLNF PADVVIATLS AGQRLQLREE  180
GANGIVCSGA LKGHGQLDSG GTTDELQEMG PELLWPRFSE REEGMMCGPV FHTLKHEAVH  240
YP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-28ERF family protein