PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR96810.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 135aa    MW: 15192.4 Da    PI: 9.7048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR96810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-0533731055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r R +++ +++  L++l+ +      +K + a++L +A+ YIk Lq
  RWR96810.1 33 RERKEKVGEKITALQQLVSPF-----GKTDTASVLSEAMGYIKFLQ 73
                78889999**********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MTELKRRQEY IDHGDRFCST VKRHKTQGSL SMRERKEKVG EKITALQQLV SPFGKTDTAS  60
VLSEAMGYIK FLQEQVQVLS APYLQTTPTG NPLESEYYSL QSRGLCLVPV TWTLSIARTN  120
GADLWAPVVK NTPSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.38e-51bHLH family protein