PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR96811.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 239aa MW: 26224.8 Da PI: 4.7764

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR96811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.2	5.9e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC +C e H+ H++ RWR96811.1 4 QCDVCEKAPASVICCADEAALCVNCDIEVHEAnklaskHQR 44 7*****************************76677777765 PP
2	zf-B_box	26.7	1.1e-08	53	85	2	34
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 + ++C+ ++ek + +fC +++ l+C+dC + H RWR96811.1 53 KLPRCDICQEKAAFIFCVEDRALFCRDCDEPVH 85 789*************************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MKIQCDVCEK APASVICCAD EAALCVNCDI EVHEANKLAS KHQRLLLQSL SNKLPRCDIC 60 QEKAAFIFCV EDRALFCRDC DEPVHLPGSL SGNHQRLLAT GIQVGLSSIC SKDSETGHPE 120 PPKRSSSKPV MKVPASQPHA FMPSSWAVDD LLQFSDVEAE DKKEAIGFGD LDWITDIGLY 180 NEQVPQSQEA LTAAEVPQLP FTPASNATSY KPTKPFSSHK KPRLQISDDE EFFIVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-97	DBB family protein