PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97061.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 745aa MW: 80219.2 Da PI: 6.9622

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	426	463	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + RWR97061.1 426 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 463 554459******************************88 PP
2	BELL	125	2.9e-40	287	358	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kkakL+s+l+eV++rY+qy++q+q+v+ssFea+ag gsak Yt+lAl++iS++FrcL+dai++qi RWR97061.1 287 ERQELQMKKAKLISMLDEVEQRYRQYHHQMQIVVSSFEAAAGNGSAKTYTALALQTISKQFRCLRDAITGQI 358 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence
MATYYGASEM QSDGLQTLYL MNPGYVGYSD PQTPASTNMV FLNSAGNPLN PANLPHPSQQ 60 NHHFVGIPLQ APASSQDHNR PSVHNQHDIS SVHGFVPRVH YNLWTPMDSA GGAAAVGNHH 120 QIATTSAGGG SGGGGISDMT SLLGLRRSVG PPPPAMTASQ QGLSLSLSPQ QPVYGTYRQE 180 PDVPAPAPPP AISPASGDDM RISGSSSSAS AVSNGISGLQ SVLMGSKYLK AAQQLLDEVV 240 SVGKDFKSDS NKGSKGQLKG NRDSPAAEAS SGGEINGKRA AELTTAERQE LQMKKAKLIS 300 MLDEVEQRYR QYHHQMQIVV SSFEAAAGNG SAKTYTALAL QTISKQFRCL RDAITGQIRA 360 TSRSLGEEDC LGGGKGEGSS SRLRFVDQHI RQQRALQQLG MMQNNAWRPQ RGLPERSVSV 420 LRAWLFEHFL HPYPKDSDKH MLAKQTGLTR SQVSNWFINA RVRLWKPMVE EMYLEETKEQ 480 EQNGSEDKPS KSEINEDMAS KSMASQETCP IGTEQMNGNK AKAENANDSK APLNGMSNSP 540 GALSATMGNA RNQACFSLIG SSSSDAHAQA SYHDSDGMLQ GNPKKARIGQ LESLNTIASM 600 ETDLKSDEDN DKEIYMMKFS SDRPTRDGYS LIPGNAGQGG GFGAYSIGEI GRFDPEQFAP 660 RFSGNGVSLT LGLPHCENIS LSGTQQTYLS NQNIPLGRRL EMGNETNDFC SINTPSATHS 720 ANAYESINIQ NRKRFAAQLL PDFVA

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence

MATYYGASEM QSDGLQTLYL MNPGYVGYSD PQTPASTNMV FLNSAGNPLN PANLPHPSQQ  60
NHHFVGIPLQ APASSQDHNR PSVHNQHDIS SVHGFVPRVH YNLWTPMDSA GGAAAVGNHH  120
QIATTSAGGG SGGGGISDMT SLLGLRRSVG PPPPAMTASQ QGLSLSLSPQ QPVYGTYRQE  180
PDVPAPAPPP AISPASGDDM RISGSSSSAS AVSNGISGLQ SVLMGSKYLK AAQQLLDEVV  240
SVGKDFKSDS NKGSKGQLKG NRDSPAAEAS SGGEINGKRA AELTTAERQE LQMKKAKLIS  300
MLDEVEQRYR QYHHQMQIVV SSFEAAAGNG SAKTYTALAL QTISKQFRCL RDAITGQIRA  360
TSRSLGEEDC LGGGKGEGSS SRLRFVDQHI RQQRALQQLG MMQNNAWRPQ RGLPERSVSV  420
LRAWLFEHFL HPYPKDSDKH MLAKQTGLTR SQVSNWFINA RVRLWKPMVE EMYLEETKEQ  480
EQNGSEDKPS KSEINEDMAS KSMASQETCP IGTEQMNGNK AKAENANDSK APLNGMSNSP  540
GALSATMGNA RNQACFSLIG SSSSDAHAQA SYHDSDGMLQ GNPKKARIGQ LESLNTIASM  600
ETDLKSDEDN DKEIYMMKFS SDRPTRDGYS LIPGNAGQGG GFGAYSIGEI GRFDPEQFAP  660
RFSGNGVSLT LGLPHCENIS LSGTQQTYLS NQNIPLGRRL EMGNETNDFC SINTPSATHS  720
ANAYESINIQ NRKRFAAQLL PDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-133	TALE family protein