PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR97130.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 150aa    MW: 16721.6 Da    PI: 4.4756
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR97130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB43.67e-148104596
       NF-YB   5 drflPianvsrimkkvlPanak.....iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                  ++lP + v r++k  l + +      + kda     e +  fi ++++ a+d c++ kr+ in+dd+l al ++ f + ++pl+v l+++r+ +++
  RWR97130.1   8 AEELPRTIVRRVVKDKLSQSSDgedviLHKDALLAFSESARIFIHYLSATANDICKESKRQIINADDVLKALEEVEFPELIDPLRVALNEFRKKNAA 104
                 5678999999999999986543223337899999**********************************************************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MPKSQTEAEE LPRTIVRRVV KDKLSQSSDG EDVILHKDAL LAFSESARIF IHYLSATAND  60
ICKESKRQII NADDVLKALE EVEFPELIDP LRVALNEFRK KNAAKKSGAK ANEADKKRKL  120
EKDPVAPNEE LEGNEDDANG ICGDDDDDES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199119RKKNAAKKSGAKANEADKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-37NF-YB family protein