PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR97419.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 219aa    MW: 25096.2 Da    PI: 7.9493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR97419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.3e-105099555
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                 + +E+rRR ++++ +++L +l+P+     +s+  +  ++ L +A+++Ik Lq
  RWR97419.1 50 RKTVEKRRRIQMKTLYSKLNSLIPHhH---HSGDvPMLSDQLDEAINHIKTLQ 99
                5789*********************66...666657788*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTQAPMCRPI FPQCKGSRFK QMSGEKLFAG VEETMEEDKK KCHPLPKMDR KTVEKRRRIQ  60
MKTLYSKLNS LIPHHHHSGD VPMLSDQLDE AINHIKTLQE DLEKMKERKK SLMGMDEINK  120
RMNMGTAIGL QPTRIEIQDL GSTMVVLLIS GLDNQLIFYK SICVLEEEGA EVVNATYYIM  180
DDKVFHTIHS KIPDCELGYK GAKISGRLHE LVHEISSNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13958KKKCHPLPKMDRKTVEKRRR
25559KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-37bHLH family protein