PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR97509.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 324aa    MW: 36048.5 Da    PI: 8.0435
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR97509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.83e-55141421129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppG+rFhPtdeel+++yL kkv + ++ + ++i+ vd++k+ePw+Lp+k+k +ekewyf+s rd+ky+tg r+nrat++gyWkatgkd+e++s+ +g+
  RWR97509.1  14 LPPGYRFHPTDEELITYYLMKKVLDGNFIA-RAIAVVDLNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSkSGS 111
                 79*************************887.88***************99999****************************************986788 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                 lvg+kktLvfykgrapkgekt+Wvmheyrle
  RWR97509.1 112 LVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142
                 8****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
METFHHFDTA EAQLPPGYRF HPTDEELITY YLMKKVLDGN FIARAIAVVD LNKCEPWELP  60
EKAKMGEKEW YFYSLRDRKY PTGLRTNRAT EAGYWKATGK DREIFSSKSG SLVGMKKTLV  120
FYKGRAPKGE KTNWVMHEYR LEGKFSYHYL PRTSKDEWVV SRVFQKSGGG GGGGGKKTRA  180
AGSGVYTDTG SPSTPSLPPL LDSCVYTTSG CQESCSYESE SAREHVPCFS TVPAGVAATF  240
GHPPPSMNGA PCGFPSLRSL QENLQLPFFF SAVAQQNEMG GGSGNWAESE QKVVVERNGR  300
QELQQMGTTE LDCLWNYSAA TRPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-105NAC family protein