PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97633.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 474aa MW: 52753.1 Da PI: 4.8879

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.8	3.2e-30	226	276	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr+rWtpeLHe+Fv+av++LGGse+AtPk +l+lmkv++Lt++hvkSHLQ RWR97633.1 226 KPRMRWTPELHECFVDAVNKLGGSERATPKGVLKLMKVESLTIYHVKSHLQ 276 79************************************************* PP
2	Myb_DNA-binding	48.9	1.5e-15	228	277	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT+e++e +vdav++lGg t+k + + m + +t +++ks++q RWR97633.1 228 RMRWTPELHECFVDAVNKLGGSeraTPKGVLKLMKvESLTIYHVKSHLQV 277 89****************99************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MSSPLPALPK YPKMPEAQEV SMGREMRTTP ATARATSLVS DSAVVGHLFS SDSGFSSDLH 60 FSSNSLPERH SFNAPFISQS SNSRTSVLLP DSSHSGLFQP ETLSSSATEN TEWCTDPLQG 120 FLDFPDNVSV HNSQIQSSGV SSEDQMRQTD WQEWFIADDD NLAPNWNDLV DVSAVDPEPK 180 TLCPASNSSS TLSVCEPQIN QQIHVPSIEV CVVASSPSST NGAAPKPRMR WTPELHECFV 240 DAVNKLGGSE RATPKGVLKL MKVESLTIYH VKSHLQVCIE VFPLKIYFVE LHSFLEFDLT 300 LLELQKYRTA RYRPDSSEGT SERRVTPLEE MSALDLKTGI EITEALRLQM EVQKRLHEQL 360 EIQRNLQLRI EEQGRYLQMM FEKQCKAGGD KLKVPSTSED PSAQTSELMD QVEKTETNTN 420 KEKRTEESSL QMDGKQKMPP TKQPDGLKLN TEGESISPPS KRAKTQDAET SSAK

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MSSPLPALPK YPKMPEAQEV SMGREMRTTP ATARATSLVS DSAVVGHLFS SDSGFSSDLH  60
FSSNSLPERH SFNAPFISQS SNSRTSVLLP DSSHSGLFQP ETLSSSATEN TEWCTDPLQG  120
FLDFPDNVSV HNSQIQSSGV SSEDQMRQTD WQEWFIADDD NLAPNWNDLV DVSAVDPEPK  180
TLCPASNSSS TLSVCEPQIN QQIHVPSIEV CVVASSPSST NGAAPKPRMR WTPELHECFV  240
DAVNKLGGSE RATPKGVLKL MKVESLTIYH VKSHLQVCIE VFPLKIYFVE LHSFLEFDLT  300
LLELQKYRTA RYRPDSSEGT SERRVTPLEE MSALDLKTGI EITEALRLQM EVQKRLHEQL  360
EIQRNLQLRI EEQGRYLQMM FEKQCKAGGD KLKVPSTSED PSAQTSELMD QVEKTETNTN  420
KEKRTEESSL QMDGKQKMPP TKQPDGLKLN TEGESISPPS KRAKTQDAET SSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	6e-85	G2-like family protein