PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR97791.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 341aa MW: 39087.8 Da PI: 6.7569

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR97791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.5e-19	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W++++++ g+ R++k+c++rw +yl RWR97791.1 13 RGLWSPEEDEKLIRYITTHGHGCWSSVPKHAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ RWR97791.1 66 RGSFSAQEERVIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MGHHCCSKQK VKRGLWSPEE DEKLIRYITT HGHGCWSSVP KHAGLQRCGK SCRLRWINYL 60 RPDLKRGSFS AQEERVIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPKTHNLLPS HNKNHACNVS QLHHQSSTPF TINSHMKMGE SHSSVDMNTP FITLPTPQPP 180 PPQLPLHPPL QEAIQIPTNF PYEDLNTSST NTTLLWNIKE QSSNHPMDFT STSLENTPIS 240 SSFNPLEYGY TDENCLWGSN VQPLEAQAMN HHQQQLQHQE QQQQPKLREM DFDDSNEEKG 300 QDMETSYNKS HFDLEFMEST LMPCSIYGNT GSMEPLAWDD C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	3e-85	MYB family protein