PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR97923.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 234aa    MW: 26052.7 Da    PI: 3.9911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR97923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.9e-09113154854
                 HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  Er+RR+r+N+ +  Lr+l+P  +      K++K +iL  A  Y+++L
  RWR97923.1 113 SERNRRKRLNQQLLALRSLVPCiS------KMDKRSILMDAATYLQNL 154
                 6*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEFENLNFWS PESGDSDGVF RQIPDCPSAI FSPIQCDYGS YLEYMEMELL QGGAREPMMM  60
MMEEEEEDKS GGGNEEEEPE EDDNGRGEGG VVLDGGATDD GILGNGGCKN LLSERNRRKR  120
LNQQLLALRS LVPCISKMDK RSILMDAATY LQNLHREIEE VKREIATQET SDTSTTSSES  180
NLPSPEETIQ CNESSPPQHQ ILNIDIEEMD ERTFAVKVVF QEGSRGSVSG SVHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.18e-10bHLH family protein