PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR98282.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family M-type_MADS
Protein Properties Length: 76aa    MW: 8502.09 Da    PI: 10.6223
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR98282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF102.51.5e-32958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krienk+nrqvtfskRrng+lKKA+ELS+LCdaeva+i+fss+gklye+ 
  RWR98282.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSILCDAEVALIVFSSRGKLYEFG 58
                79**********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSILCD AEVALIVFSS RGKLYEFGSV  60
GFCSLVLLIG SPIQAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.14e-38MIKC_MADS family protein