PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR98321.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 231aa MW: 26314.8 Da PI: 10.4785

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR98321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	38.2	3.7e-12	1	42	9	50
HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--H CS HSF_DNA-bind 9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnf 50 ++ed++++ ++sws+ nsf+v+d+++fa+k+LpkyFkhs + RWR98321.1 1 MVEDPTTDLIVSWSQARNSFIVWDSHKFATKLLPKYFKHSYV 42 89*************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MVEDPTTDLI VSWSQARNSF IVWDSHKFAT KLLPKYFKHS YVTLNPTLCL NPIISCAFAY 60 LYYGSQPYPH GNNVHRDLER SIQTDGNSQM RDFWRAEASV EEHQEEKTCL SKYAAAGGSL 120 RGIGRIRARS STATTNLASS ARRHGRTVAR DRKKAATDDG LPCQTLKNPA FVQRLIQRRE 180 RQRELGSIGR KRRLPANGCL ENLQQEVISQ MGSQIMSYAR RNKKKQQSEL I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	5e-18	HSF family protein