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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV76886.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | SAP | ||||||||
| Protein Properties | Length: 387aa MW: 43165.1 Da PI: 6.5616 | ||||||||
| Description | SAP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | SAP | 434.5 | 9.4e-133 | 8 | 385 | 75 | 453 |
SAP 75 nvfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavr 173
n +qvcstwra srs+llwq+lt+r+W+ ++ Wr+e++ hrta+nfr rry+y +l p+ ++ alsCr+l+lsd++laaGf +G+v
RWV76886.1 8 NYWQVCSTWRAASRSELLWQHLTHRVWTSRRRSPPSWRDEFVRLHRTAANFRARRYAYSHL--LPS------SPVALSCRRLTLSDHHLAAGFLNGSVC 98
568******************************************************9865..443......4689*********************** PP
SAP 174 lfdletrlhvstflpq.hrdrlGrfsravsGivis..dsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGraf 269
lfdl + + + t++p+ h drlGrfsra+sGiv++ d rl+fa+ dGd+hv + + a++ +ra++G++++dG+lvdf+G+grWwvGl+aGvpGr++
RWV76886.1 99 LFDLPAGQLLATYWPDpHIDRLGRFSRAISGIVLAepDERLAFASQDGDVHVVSLSV--AGSVQRAHVGNLMEDGTLVDFTGKGRWWVGLFAGVPGRSW 195
**************96499***************844689****************9..558899********************************** PP
SAP 270 hiWdaeteelvfvGGsltdPeavmGWhmltelt.elvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvat 367
h+Wda te+lv+vGG+ltdP+av GWhml +l +vGrvr+ e +++ Ct++++ ++dl + g +l e +G +v s+da ++ +++vdsrG a+
RWV76886.1 196 HVWDAATEQLVYVGGTLTDPDAVLGWHMLIDLSsPAVGRVRIVEPGFVIGCTASSMEIVDLNDAGAMLIRLELPHGAVVDSVDACEDRVIAVDSRGLAM 294
********************************9568*********************************9***************************** PP
SAP 368 vrrvenleevcrfrv.rg.....aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfg 453
v+r l+e+crf+ r+ +++ +C+n+ ya+v ++ +rvW+ + e ylys+rer+ge+ + a +r+va+ ++d+ +hl+dfg
RWV76886.1 295 VHRLPALQEICRFSTlRRaeeqhELGEMSVCMNRDYAVVSSADRVRVWDATTGE-YLYSFRERIGEALVVAAGERYVAAWATDTGLHLWDFG 385
*************75244553334567899*******************99966.************************************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 387 aa Download sequence |
MRLSIWGNYW QVCSTWRAAS RSELLWQHLT HRVWTSRRRS PPSWRDEFVR LHRTAANFRA 60 RRYAYSHLLP SSPVALSCRR LTLSDHHLAA GFLNGSVCLF DLPAGQLLAT YWPDPHIDRL 120 GRFSRAISGI VLAEPDERLA FASQDGDVHV VSLSVAGSVQ RAHVGNLMED GTLVDFTGKG 180 RWWVGLFAGV PGRSWHVWDA ATEQLVYVGG TLTDPDAVLG WHMLIDLSSP AVGRVRIVEP 240 GFVIGCTASS MEIVDLNDAG AMLIRLELPH GAVVDSVDAC EDRVIAVDSR GLAMVHRLPA 300 LQEICRFSTL RRAEEQHELG EMSVCMNRDY AVVSSADRVR VWDATTGEYL YSFRERIGEA 360 LVVAAGERYV AAWATDTGLH LWDFGDM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G35770.1 | 1e-105 | SAP family protein | ||||




