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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV76996.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | NAC | ||||||||
| Protein Properties | Length: 313aa MW: 35565 Da PI: 6.6748 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 166.8 | 7.5e-52 | 27 | 154 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98
lppGfrFhPtdeelvv+yL++k++ + ++ +i+e+d+yk++Pw+Lp k+ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk++ k ++
RWV76996.1 27 LPPGFRFHPTDEELVVHYLCRKTACQCQPV-PIIAEIDLYKYDPWELPDKALFGNREWYFFTPRDRKYPNGSRPNRAAGKGYWKATGADKPISPKgSNM 124
79**********************999999.88***************7777899**************************************986667 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+vg+kk Lvfy+g+apkg+ktdW+mheyrl
RWV76996.1 125 TVGIKKALVFYSGKAPKGVKTDWIMHEYRL 154
7***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 313 aa Download sequence |
KTHLPVASPA EKTSMGRTRD AEAELNLPPG FRFHPTDEEL VVHYLCRKTA CQCQPVPIIA 60 EIDLYKYDPW ELPDKALFGN REWYFFTPRD RKYPNGSRPN RAAGKGYWKA TGADKPISPK 120 GSNMTVGIKK ALVFYSGKAP KGVKTDWIMH EYRLADVNRT ANKGSLRLDN WVLCRLYNKK 180 NTWEKTKMQK QEETSFGDTI QSVDDAASDS FKTPESDVEN EVVLPDFDDL GYLSQASTGV 240 LALSTCKTAG HQMIEKSQKE DSEWFMDLKL DDLQSSYINF GSTPITDATN QDYYLQSFVS 300 PLLRPNNTNM QQF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G01720.1 | 5e-89 | NAC family protein | ||||




