PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV77113.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 215aa MW: 24200.4 Da PI: 9.8393

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV77113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+ +++ +G g+W+ ++ g+ R++k+c++rw +yl RWV77113.1 14 KGTWTKEEDQRLISYIRIHGEGCWRFLPKAAGLLRCGKSCRLRWINYL 61 799***************************99**********97 PP
2	Myb_DNA-binding	54	4e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eE el+++++ lG++ W++Ia++++ gRt++++k++w++ RWV77113.1 67 RGNFTNEENELIIKLHGALGNK-WSAIAARLP-GRTDNEIKNHWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MGRSPCCERA HTNKGTWTKE EDQRLISYIR IHGEGCWRFL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TNEENELIIK LHGALGNKWS AIAARLPGRT DNEIKNHWNT NIKRKLVGRG 120 LDPRTHRPPV HGGSQSSGVS ADDDSQRSNL DLDLTISLPS SRSSVAETIC FCYHLGIRSS 180 EACSCRTSSA MRFLSFQYTS SASSSPQPFL LRDHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	6e-81	MYB family protein