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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV77840.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 176aa MW: 19351.8 Da PI: 10.3793 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 54.6 | 2.7e-17 | 40 | 88 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++GVr +k +g+WvAeIr+p +kr r++lg++ ta Aa+a++ a +l+g
RWV77840.1 40 FRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAIAAARAYDTAVFYLRG 88
8*****99.**********9...336*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 176 aa Download sequence |
MEGQCCSTST SEEPRKPPPA ASRRRAVAAG SVGGGRDRPF RGVRMRKWGK WVAEIREPNK 60 RSRIWLGSYS TAIAAARAYD TAVFYLRGRS ARLNFPDEIL AEDPETEGFG SVMSADSIRK 120 KATEVGARVD ALQATLVPPQ RPPSPPLPQQ HNLQLQVRSK NPDLNQQPSP ESSDVD |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G46768.1 | 3e-37 | ERF family protein | ||||




