PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78020.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 619aa    MW: 67209.2 Da    PI: 4.4865
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS356.15.1e-1092416192374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.....ppsetseknsseelaalklfsevsPilkfsh 95 
                  e Ll+cA+ +++ d  la + L +++e as+ gdp++R+a+yf+eAL++rl++ +++ +++      p+ ++ +++ ++ +  ++++++++P+ kf+h
  RWV78020.1 241 LESLLDCAR-LADADPDLAAKSLIHVREYASELGDPTERVAFYFAEALNRRLLDDQKQHSHSStaavpPCFTSFDSSPEDFTLCYTVLNDACPYSKFAH 338
                 5789****9.5667999***********************************99555444332111224555555568888999999************ PP

        GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                 ltaNqaIlea+e++ r+Hi+Df+i qG+QW+aLlqaLa+Rp+g+p ++R+ g+ +p  g   + +l +tg+rL++fA+ l+++fef++ + + +++l+ 
  RWV78020.1 339 LTANQAILEATESAARIHIVDFGIIQGIQWAALLQALATRPAGKPsRVRVSGIPAPMLGaaPAASLTATGNRLRDFAAILDLDFEFDP-ILTPIAELTA 436
                 *****************************************776669********9998999**************************.799******* PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                 + +r++++E+++Vn++lql++lld+s ++ +   +vL++ ksl P+vv++ e ea+ n+++F+erf  al yy+a+fdsl+  + r+s er+ vEr ll
  RWV78020.1 437 SCFRIESDESVVVNFMLQLYHLLDDSPESVE---RVLEIAKSLGPRVVTLGEYEASVNRGRFVERFRAALAYYAAVFDSLDPAMERDSAERAHVERLLL 532
                 ***********************99998888...9**************************************************************** PP

        GRAS 291 greivnvvac.egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                 g +i  +v    g++rrer+e +e+Wr+ +e++GF+p+p+s++a++qaklll +++ s  y + ++   ++ l W drpL++vS+Wr
  RWV78020.1 533 GHRILGAVGPgDGRNRRERMEAKEEWRAVMERCGFEPLPVSNYAVSQAKLLLWNYDySYKYALLDSAPGFLtLAWGDRPLLTVSSWR 619
                 ********9636889*****************************************8888888766555544**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    
MAYTCAESGN LMAIAQQVIQ QQQQQQLAAS ANPFSTSTQP WGASHHHQQH MPDHFPFVIS  60
DAEAAFPDPF TPDPAAGFGA PAGCSGHLDQ APFRLCDFHS SAAAVTPEFD TEEWMESLIG  120
ESPADNCDLM SDPWQAAAGG SGALFADVFP SCSADINHPS HPASASGLNC VLFSQPSEIA  180
HLPPIQHDHQ ATAVVALNAP ELASETPSFD PPELNKDSGA VAFASVRDEV PESNTSSPPL  240
LESLLDCARL ADADPDLAAK SLIHVREYAS ELGDPTERVA FYFAEALNRR LLDDQKQHSH  300
SSTAAVPPCF TSFDSSPEDF TLCYTVLNDA CPYSKFAHLT ANQAILEATE SAARIHIVDF  360
GIIQGIQWAA LLQALATRPA GKPSRVRVSG IPAPMLGAAP AASLTATGNR LRDFAAILDL  420
DFEFDPILTP IAELTASCFR IESDESVVVN FMLQLYHLLD DSPESVERVL EIAKSLGPRV  480
VTLGEYEASV NRGRFVERFR AALAYYAAVF DSLDPAMERD SAERAHVERL LLGHRILGAV  540
GPGDGRNRRE RMEAKEEWRA VMERCGFEPL PVSNYAVSQA KLLLWNYDYS YKYALLDSAP  600
GFLTLAWGDR PLLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-157GRAS family protein