PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78662.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 508aa    MW: 53864.6 Da    PI: 5.1592
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2453.1e-752925032228
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lLl+cAeav++++le+a++lL ++sel++p g++ qR+aayf eA++arl++s+ +ly+ lp+ + +     + ++a+++f+ +sP++kfsh+taNq
  RWV78662.1 292 LTLLLHCAEAVAADNLEEANRLLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGLYAPLPTVPHR----HRLASAFQVFNGISPFVKFSHFTANQ 386
                 579************************************************************999997....788999******************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 aI ea+e+e+rvHiiDfdi+qGlQWp L++ LasRp+gpp++R+Tg+gs    s ++le+tg+rL++fAe+lg+pfef + va+++ +l++e+L v+++
  RWV78662.1 387 AIQEAFEREDRVHIIDFDIMQGLQWPGLFHILASRPGGPPRVRLTGLGS----SMDALEATGKRLSDFAETLGLPFEFVP-VAEKVGNLDPERLGVSRR 480
                 *************************************************....***************************.7***************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevL 228
                 EalaV++ +  h+l+d ++s ++    +L
  RWV78662.1 481 EALAVHWLH--HSLYDVTGSDTN----TL 503
                 ********9..888888887776....44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
EVLPGQPSPL FNPPSTLPVD VGQQSAAVSV LLSVTTSSTP PALLPSLPAP PPPALPSLAV  60
CGFSGLPLFP PDDDRIALPS SNAEGLQLVS SSAIDGGGGS SDDAGVGTAW VDGIIRDIIN  120
SSAGGEVSIP QIVNSVREIV HPCNPGLAAL LEFRLQSLSS DPSPAAALHS LPNSAALDPS  180
DKRRRDTRMA PPLPETVQAP KRANQAPPFT FAPAAAGGGW EEPTSRLQSA QQNPQPQQQP  240
QPQPQPQRSS TSVSSDEATA ATAAASAAAA AAARKREEMQ QRKRDEEGLH LLTLLLHCAE  300
AVAADNLEEA NRLLLEISEL STPFGTSAQR VAAYFSEAMS ARLVSSCLGL YAPLPTVPHR  360
HRLASAFQVF NGISPFVKFS HFTANQAIQE AFEREDRVHI IDFDIMQGLQ WPGLFHILAS  420
RPGGPPRVRL TGLGSSMDAL EATGKRLSDF AETLGLPFEF VPVAEKVGNL DPERLGVSRR  480
EALAVHWLHH SLYDVTGSDT NTLWLLQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-127GRAS family protein