PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78878.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 173aa    MW: 19885.8 Da    PI: 7.57
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.4e-086286226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                ++++C+ +++ G C++G+rC+++H 
  RWV78878.1 62 DRVNCPLYFKIGACRHGPRCSRHHT 86
                6899********************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVSAIRPVER CFKVNNAWDP RHETPYVEVN DRVSFFLPPP LQKGDREAMV EHLALIFGTE  60
KDRVNCPLYF KIGACRHGPR CSRHHTQPSI SPTLLHSNMN QRIDNAVTPG LDSQGQPIDP  120
SKIQEHFEVP LTIYLSSSYS SSVDLKIRIF SHLIRQDFFS LSPYMEIMQV YCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44785.11e-25C3H family protein