PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78892.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 233aa    MW: 24513.7 Da    PI: 12.233
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26058.81.5e-183889152
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpee 52
                +CaaCk+lrr+C+ +C lap fp ++p kf  +h++FGasn++k+l+  ++e
  RWV78892.1 38 PCAACKILRRRCTVSCLLAPFFPPTEPLKFTTAHRVFGASNIIKILQVSSRE 89
                7*********************************************976554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MSSSDTATAS ATTKTASSPS LSSSANSGPP PHPTAPSPCA ACKILRRRCT VSCLLAPFFP  60
PTEPLKFTTA HRVFGASNII KILQVSSREF NSHSQERSLM PSHTLTGAAG EQEGGRGGQH  120
GVRGERQVER SSLRERRGHL PPPEASGRAP SAAGPSAGEA CHLASSARAP VRFNGDGSVA  180
AAAPGRGHGW RRRRLLHASE RRVLRRRLRR PGIGLGGTPV GMRNLHVGKL ASH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195WRRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.15e-20LBD family protein