PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79171.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 187aa MW: 20925 Da PI: 10.1637

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19	3.9e-06	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RWV79171.1 74 FVCEICNKGFQRDQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	13	0.00031	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +++ RWV79171.1 150 WKCDKCSKKYAVQSDWKAHSKVC 172 58*****************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MELENSSVMT VSNSGSGEAS VSSSGQQQPP APPPPLPPPP ISGVKKKRNL PGNPDPEAEV 60 IALSPKTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLRQRTGKEV RKRVYVCPEP 120 SCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK VCGTREYRCD 180 CGTLFSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	5e-90	C2H2 family protein