PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79182.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 575aa MW: 61890.6 Da PI: 7.7009

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.2	8.9e-36	222	298	2	66
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............s 66 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++ s RWV79182.1 222 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDELAELppwtpsatvassS 298 79**************************************************************6644443332220 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MRADPRVVIM EQSRAECRVE RQLGIAFHGM DTIGKFNTTI LPPAAVAHKK KATAKGNWAT 60 VGQSDLEEEE EEDERREEKV VGSFGNAMLA TDRKLEQGRK KREKDLDPTE APYLPIPAEP 120 NESGGGEREV ENGTRVQLHQ IHRHDRSAYF SSSSAATASF SEYAWLPERM GEGYSHQSIF 180 LQQQQQQLQR PVARSRLGGG GVRVGAVGEI VEVQGGHIVR STGRKDRHSK VCTAKGPRDR 240 RVRLSAHTAI QFYDVQDRLG YDRPSKAVDW LIKNAKAAID ELAELPPWTP SATVASSSRP 300 PPPPNQFPST EQATGEASRK PIPVADPVAS VAFGFGGGGG GVGGDANASF LPPSLDTDSI 360 VDTIKSFFPV AAATSLSSST PSVGFHTYSS DLPSRASSQV KDLRLSLQSF QDPIFRNPES 420 SHRHRHHGQY HQSSAPPTHD AHFPGSVQFA FGSDEQGHRI SPWNVVESSS GGHGFSFPPP 480 QAVPLHSVLG HSQLFSQRGP LQSSNPPAIR AWADAAAAAA DHRMQPASHP SISSIGFASG 540 TGFSGFQVPA RIQGEEEHVG IIIGKPPSAS SAARS

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MRADPRVVIM EQSRAECRVE RQLGIAFHGM DTIGKFNTTI LPPAAVAHKK KATAKGNWAT  60
VGQSDLEEEE EEDERREEKV VGSFGNAMLA TDRKLEQGRK KREKDLDPTE APYLPIPAEP  120
NESGGGEREV ENGTRVQLHQ IHRHDRSAYF SSSSAATASF SEYAWLPERM GEGYSHQSIF  180
LQQQQQQLQR PVARSRLGGG GVRVGAVGEI VEVQGGHIVR STGRKDRHSK VCTAKGPRDR  240
RVRLSAHTAI QFYDVQDRLG YDRPSKAVDW LIKNAKAAID ELAELPPWTP SATVASSSRP  300
PPPPNQFPST EQATGEASRK PIPVADPVAS VAFGFGGGGG GVGGDANASF LPPSLDTDSI  360
VDTIKSFFPV AAATSLSSST PSVGFHTYSS DLPSRASSQV KDLRLSLQSF QDPIFRNPES  420
SHRHRHHGQY HQSSAPPTHD AHFPGSVQFA FGSDEQGHRI SPWNVVESSS GGHGFSFPPP  480
QAVPLHSVLG HSQLFSQRGP LQSSNPPAIR AWADAAAAAA DHRMQPASHP SISSIGFASG  540
TGFSGFQVPA RIQGEEEHVG IIIGKPPSAS SAARS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	104	RKKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-64	TCP family protein