PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79372.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 493aa MW: 54740.7 Da PI: 6.0588

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.8	2.1e-06	252	273	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H RWV79372.1 252 FCLICGKGFKRDANLRMHMRGH 273 5*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MMSEISRNLK PGLPFVPCDS TNICYVARQE QSFSEFPPPQ VTQSHGLYAR EQKTETKKQL 60 EPSSAVNDLV MDWNPRLMLS NLSFLEQKIH QVQDIVRSII SQEGRANELA AQQQLVTADL 120 TYIIIQLIST AGTLLPNIKN ALLSATPPVG QPGVVANLPE NASQKQHEVL PVELAKASEY 180 DELIKDLNCG GEGDELIKCL NNSVAEASDS IPIEDHDIKD YDDGMDGENL PPGSYEVLQL 240 EKEEILAPHT HFCLICGKGF KRDANLRMHM RGHGDEYKTP AALAKPSKEA SSEPAIIRRY 300 SCPFVGCKRN KEHKKFQPLK TILCVKNHYK RSHCDKSYTC SRCKTKKFSV IADLKTHEKH 360 CGRDKWICSC GTTFSRKDKL FGHVALFQGH TPAIHMDDAK VSGTSDHAQF SETTNGMVAD 420 MAYNFSGNAS DDTQSLDIKD VDDGQGYFSP MNFDACNFGG LDEFPRSAYD VSESPFSFLS 480 TGTCSFIPRN GEN

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MMSEISRNLK PGLPFVPCDS TNICYVARQE QSFSEFPPPQ VTQSHGLYAR EQKTETKKQL  60
EPSSAVNDLV MDWNPRLMLS NLSFLEQKIH QVQDIVRSII SQEGRANELA AQQQLVTADL  120
TYIIIQLIST AGTLLPNIKN ALLSATPPVG QPGVVANLPE NASQKQHEVL PVELAKASEY  180
DELIKDLNCG GEGDELIKCL NNSVAEASDS IPIEDHDIKD YDDGMDGENL PPGSYEVLQL  240
EKEEILAPHT HFCLICGKGF KRDANLRMHM RGHGDEYKTP AALAKPSKEA SSEPAIIRRY  300
SCPFVGCKRN KEHKKFQPLK TILCVKNHYK RSHCDKSYTC SRCKTKKFSV IADLKTHEKH  360
CGRDKWICSC GTTFSRKDKL FGHVALFQGH TPAIHMDDAK VSGTSDHAQF SETTNGMVAD  420
MAYNFSGNAS DDTQSLDIKD VDDGQGYFSP MNFDACNFGG LDEFPRSAYD VSESPFSFLS  480
TGTCSFIPRN GEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-177	C2H2 family protein