PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79565.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Protein Properties

Length: 759aa MW: 83291.4 Da PI: 6.5086

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.5	5.6e-14	610	700	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++ v + + + + +++ +Fv++ngL+egDf+v++ ++ ++++++++ RWV79565.1 610 QKVLKQSDVGSLGRIVLPKKEAESHlpELDARDGISIPMEDIGTSQFVVGI--WSNTQ---YRDNSGDFVRSNGLQEGDFIVIY--SDvKCGKYMIRG 700 79***********************99999***************..77764...48999****************..566999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MPSSCYIHSG SKWFLSNPCE MGRENKRSEC ESRRKQGDVP FASEEVEEAM TDHKVEVEEN 60 VLGVGGGGDT TAGVDDIVLN IDGEEDLIFS EDTFPCLPDF PCLSSPSATP SPSSASTLHA 120 KNAVLSSCSS TSSSSSSSSS SSWSFLQVPD SGRVADMQQQ QQQQQAGEFQ SVDDIMMLPP 180 LPPPLDHHQS SEFADGLDIL GDIDLFDLSI DPWDPPSLFH ADEASAAVIS GGDEAVGNRE 240 KKPCQAVEEG RLHGYGEGVP QQAQEEESSE ELARIFLEWL RSNKDSISPE DLRSIKLKRA 300 TIECAARRLG RTKQGRTQLL KLILTWVQNN HLQRKRHRLP YSYDHQPRPF PISPNPSQLD 360 YSCNPWSPYS IDPSTAATHP ALLSAYAGGG NGEMGYPSAT GNPYPYHHSC GTSSVVVNNQ 420 PFSPSPDFVD PAGGPWPTQL ASALPQFAPY PGTSAPHPLS MAPPQYSGGM TNQFLGHPMY 480 HQGQRLPGTT FATKEARKKR MARQRRFSSL HQHRNHNQPP HLQHAHHPVG STDGANGSSH 540 SNTRNWGFWT SMSSSSHQMN HMAEAQNASN MQQTPPPAAQ LPQRPQLSTA STSEKRQGWK 600 GEKNLKFLLQ KVLKQSDVGS LGRIVLPKKE AESHLPELDA RDGISIPMED IGTSQFVVGI 660 WSNTQYRDNS GDFVRSNGLQ EGDFIVIYSD VKCGKYMIRG VKVRQPVEPR APSNKNTGKA 720 HQRRNGLEKM AGASKMKGRS LIHYDADNYD DEVPSSMHG

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MPSSCYIHSG SKWFLSNPCE MGRENKRSEC ESRRKQGDVP FASEEVEEAM TDHKVEVEEN  60
VLGVGGGGDT TAGVDDIVLN IDGEEDLIFS EDTFPCLPDF PCLSSPSATP SPSSASTLHA  120
KNAVLSSCSS TSSSSSSSSS SSWSFLQVPD SGRVADMQQQ QQQQQAGEFQ SVDDIMMLPP  180
LPPPLDHHQS SEFADGLDIL GDIDLFDLSI DPWDPPSLFH ADEASAAVIS GGDEAVGNRE  240
KKPCQAVEEG RLHGYGEGVP QQAQEEESSE ELARIFLEWL RSNKDSISPE DLRSIKLKRA  300
TIECAARRLG RTKQGRTQLL KLILTWVQNN HLQRKRHRLP YSYDHQPRPF PISPNPSQLD  360
YSCNPWSPYS IDPSTAATHP ALLSAYAGGG NGEMGYPSAT GNPYPYHHSC GTSSVVVNNQ  420
PFSPSPDFVD PAGGPWPTQL ASALPQFAPY PGTSAPHPLS MAPPQYSGGM TNQFLGHPMY  480
HQGQRLPGTT FATKEARKKR MARQRRFSSL HQHRNHNQPP HLQHAHHPVG STDGANGSSH  540
SNTRNWGFWT SMSSSSHQMN HMAEAQNASN MQQTPPPAAQ LPQRPQLSTA STSEKRQGWK  600
GEKNLKFLLQ KVLKQSDVGS LGRIVLPKKE AESHLPELDA RDGISIPMED IGTSQFVVGI  660
WSNTQYRDNS GDFVRSNGLQ EGDFIVIYSD VKCGKYMIRG VKVRQPVEPR APSNKNTGKA  720
HQRRNGLEKM AGASKMKGRS LIHYDADNYD DEVPSSMHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	4e-79	B3 family protein