PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79802.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 260aa MW: 27670.8 Da PI: 6.927

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W +eEd l ++v+q+G+++W++I++ ++ gR++k+c++rw + RWV79802.1 15 KGSWNPEEDAVLMRLVEQHGPRNWTLISASIP-GRSGKSCRLRWCNQ 60 799***************************.*********985 PP
2	Myb_DNA-binding	57	4.5e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+ Ede +v a+ ++G++ W+tIar ++ gRt++ +k++w++ RWV79802.1 67 RRPFTPAEDETIVAAHSLYGNK-WATIARLLP-GRTDNAVKNHWNST 111 679*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MAVVKGRGVG VQPVKGSWNP EEDAVLMRLV EQHGPRNWTL ISASIPGRSG KSCRLRWCNQ 60 LSPTVHRRPF TPAEDETIVA AHSLYGNKWA TIARLLPGRT DNAVKNHWNS TLRRRLQAAA 120 GAVDASASER PVPSSPMQLD AAAKAPVAAD SEEPGESDSG SQSRKRPCLR DDDATDRSAA 180 GSYPVTSLTL GQPGEGDGTD GGGERRLWEE PTTGMCLLAI MREMIVEEVR SSMNQLTSGG 240 ASGGGTSIII RTDSASNGQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-53	MYB family protein