PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV80064.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 242aa    MW: 24831.1 Da    PI: 7.1484
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV80064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.51.5e-40391391100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC ++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael++l+
  RWV80064.1  39 PCGACKFLRRKCMAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQ 137
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  RWV80064.1 138 AH 139
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MSGNPTPSIG GATGGGSGVA GGGGGTSGGG GSAGGGSGPC GACKFLRRKC MAGCIFAPYF  60
DSEQGAAHFA AVHKVFGASN VSKLLLHIPA HKRLDAVVTI CYEAQARLRD PVYGCVAHIF  120
ALQQQVVNLQ AELSYLQAHL ATSEMPSPPP PLPPPLVVAP IPFAISDLPS AANLPTAVDL  180
STLFNPLGQP AWTLQQQQQQ LSNSTRSPSE SSGFEGGDLQ ALARELLDRH RTATSEPPPV  240
SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.13e-72LBD family protein