PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80075.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 243aa MW: 28004.2 Da PI: 4.6326

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.4	5.2e-18	48	100	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++ +q+++Le+ Fe +++++ e++ +LA+++gL rqV +WFqNrRa++k RWV80075.1 48 KRRLRVDQVKALEKNFEVENKLDPESKVRLAQEVGLRPRQVAIWFQNRRARWK 100 4578899*********************************************9 PP
2	HD-ZIP_I/II	121.5	4.1e-39	46	138	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl +qvk+LE++Fe e+kL+pe Kv+la+e+gl+prqva+WFqnrRAR+ktkqlE+dy++Lk+++dalk +++ L++++e+L+++++e RWV80075.1 46 EKKRRLRVDQVKALEKNFEVENKLDPESKVRLAQEVGLRPRQVAIWFQNRRARWKTKQLERDYSSLKARHDALKLDHDGLRRDKEALEANVRE 138 69**************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MLCLCYFEEE ADGKHEQRFQ SLLSDRMEEV EEEEELCSYG QSSVGEKKRR LRVDQVKALE 60 KNFEVENKLD PESKVRLAQE VGLRPRQVAI WFQNRRARWK TKQLERDYSS LKARHDALKL 120 DHDGLRRDKE ALEANVRELK AELAARSAVA AEEEKRPAFV YKDGTSDTDS SVVFHDEASP 180 PYSGMVLDQH SLIGLGSRCS SFLFESTAQD EMGFLYGEMP CSSLFSEEES PSFFSWYCSE 240 GWD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	103	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65310.2	1e-43	HD-ZIP family protein