PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80098.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 350aa MW: 38687 Da PI: 7.9592

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.2e-18	19	67	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G + +W+ ++ g++R++k+c++rw +yl RWV80098.1 19 KGPWTPEEDKKLVEYIQLHGHRrSWRELPKNAGLNRCGKSCRLRWTNYL 67 79*********************************************97 PP
2	Myb_DNA-binding	55	1.9e-17	73	118	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ l+v+++ lG++ W++I+ +++ gRt++++k++w+++l RWV80098.1 73 RGKFSEEEEGLIVQLHSALGNK-WSKISTHLP-GRTDNEIKNYWNTHL 118 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
LLRKTMGRSP CCDEIHVKKG PWTPEEDKKL VEYIQLHGHR RSWRELPKNA GLNRCGKSCR 60 LRWTNYLRPD IKRGKFSEEE EGLIVQLHSA LGNKWSKIST HLPGRTDNEI KNYWNTHLRK 120 KLLRVGIDPV THQRTTDLDL LSRLPNLLAA TAKLGNLDNA LRLHADAVAR YQMLKGLITL 180 MTPSVLPPNT DAMNRLGLLA SPGRYDLLQQ NDQLEGLVNG SLAFGQDQML PTTPGLLGLV 240 NPNTPSSSHA SPVSRIPHEM MMMMMMKSSY DGSSTLTDSN TGITTPGFSS LDMPAAHSTP 300 SSVSSVSPEN EAADFVQGAC GTNASTPSQG WQGLNLGEPD EDFSWKDILE

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

LLRKTMGRSP CCDEIHVKKG PWTPEEDKKL VEYIQLHGHR RSWRELPKNA GLNRCGKSCR  60
LRWTNYLRPD IKRGKFSEEE EGLIVQLHSA LGNKWSKIST HLPGRTDNEI KNYWNTHLRK  120
KLLRVGIDPV THQRTTDLDL LSRLPNLLAA TAKLGNLDNA LRLHADAVAR YQMLKGLITL  180
MTPSVLPPNT DAMNRLGLLA SPGRYDLLQQ NDQLEGLVNG SLAFGQDQML PTTPGLLGLV  240
NPNTPSSSHA SPVSRIPHEM MMMMMMKSSY DGSSTLTDSN TGITTPGFSS LDMPAAHSTP  300
SSVSSVSPEN EAADFVQGAC GTNASTPSQG WQGLNLGEPD EDFSWKDILE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	4e-76	MYB family protein