PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80137.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 409aa MW: 46862.8 Da PI: 5.4928

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67	3.9e-21	100	203	1	86
trihelix 1 rWtkqevlaLiearr..........emeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tses 75 +Wt++ v++Li ++ e ++ +kk++W+ vsk m e+g+ +sp+qC++k+++lnkryk+++e+ +++ t+ + RWV80137.1 100 KWTDEIVRLLISVVAyvgdhddgalE---TF---DrssvakwkygatlQKKGKWKTVSKLMLEKGCYVSPQQCEDKFNDLNKRYKRLNEILGRGtTCHV 192 7***********966655553331...22...13335567777777********************************************77999 PP trihelix 76 sstcpyfdqle 86 +++ ++d+++ RWV80137.1 193 VENPLLLDSMH 203 99999999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MNNRILGGGL LPGSAAVFDS SVNQLHPHFR SLAAAPSTAG LDPDHQIGSL FAPSSGTIAT 60 SDDEDHFPSP AGDENDHECH SLPASDAGGS NKASPWQRMK WTDEIVRLLI SVVAYVGDHD 120 DGALETFDRS SVAKWKYGAT LQKKGKWKTV SKLMLEKGCY VSPQQCEDKF NDLNKRYKRL 180 NEILGRGTTC HVVENPLLLD SMHHISPKSK DDVRKILSSK HLFYREMCAY HKGQKMPNSH 240 DVNLQICPVP KLAPPSSLME DEEEDEAEGN DIGDHDEWSY ELGKKGFESF RVEIDGVLRD 300 TTKSPWEQWE WFKRRALQLE EERVDVEAEA LELEKRHFKW QRFRSKKDWE LERLRLENDR 360 LILENECMIL QVRQKELELN IRWSRDPLDS AGRRMEGELV RDPMELVML

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MNNRILGGGL LPGSAAVFDS SVNQLHPHFR SLAAAPSTAG LDPDHQIGSL FAPSSGTIAT  60
SDDEDHFPSP AGDENDHECH SLPASDAGGS NKASPWQRMK WTDEIVRLLI SVVAYVGDHD  120
DGALETFDRS SVAKWKYGAT LQKKGKWKTV SKLMLEKGCY VSPQQCEDKF NDLNKRYKRL  180
NEILGRGTTC HVVENPLLLD SMHHISPKSK DDVRKILSSK HLFYREMCAY HKGQKMPNSH  240
DVNLQICPVP KLAPPSSLME DEEEDEAEGN DIGDHDEWSY ELGKKGFESF RVEIDGVLRD  300
TTKSPWEQWE WFKRRALQLE EERVDVEAEA LELEKRHFKW QRFRSKKDWE LERLRLENDR  360
LILENECMIL QVRQKELELN IRWSRDPLDS AGRRMEGELV RDPMELVML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	3e-66	Trihelix family protein