PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV80229.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family SBP
Protein Properties Length: 238aa    MW: 25405.7 Da    PI: 8.5612
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV80229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP781.4e-2463112150
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 
                 +CqvegC++dl+ ak yh rhkvC vhsk+p+v+v+g+eqrfCqqCsrf 
  RWV80229.1  63 RCQVEGCSVDLTGAKAYHCRHKVCGVHSKSPKVTVAGMEQRFCQQCSRFR 112
                 6************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MNTKCSNAAS RACGSTDSTQ GLKIGRKTYF EDVSSSSFPV APPAPQKKGK GVVQVGKQQP  60
PPRCQVEGCS VDLTGAKAYH CRHKVCGVHS KSPKVTVAGM EQRFCQQCSR FRGFLVDLTH  120
SKLPSILQNP WQIDPSGLGA ASAPGIPHPT AGSDSSSALS LLSAQPWGST LVADCTTSYR  180
GCNRSSTSFE VRLNQVGEPD DGHFAGEIEL VPQGKRQCMG VDPSMRCRLS DDAIHWTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.18e-25SBP family protein