PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80523.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 362aa MW: 39659.8 Da PI: 8.3092

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.8	4.9e-07	213	235	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H RWV80523.1 213 HYCQVCGKGFRRDANLRMHMRAH 235 68*******************99 PP
2	zf-C2H2	11.6	0.00084	301	324	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + RWV80523.1 301 YVCNRCNlKQFSVLSDLRTHEKHC 324 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MISGASSCLQ SSPQHSFHSY QGMDDILYSS AGAAASGTDQ ITSSHALLYS LSVLREKVQQ 60 LESCVSMMTS PNRTQQESIA MGVSCAGIMI QEIILAASSL SCTLPQVAPS TAVAYDEPPP 120 GDMKVESATA WMDHSSNNSL GIGGKDDFFS SINPSTNSAN DVDNGSITRD QIRKVELPLD 180 RTGMRKECSQ GLSSNEYTII ELDAADLLAK YTHYCQVCGK GFRRDANLRM HMRAHGDEYK 240 TAAALANPTK SSKSSSSGVA LKYSCPHEGC RWNRKHAKFQ PLKSAVCVKN HYKRSHCPKM 300 YVCNRCNLKQ FSVLSDLRTH EKHCGDLRWR CSCGTNFSRK DKLMGHVALF VGHTPEPSCS 360 RH

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MISGASSCLQ SSPQHSFHSY QGMDDILYSS AGAAASGTDQ ITSSHALLYS LSVLREKVQQ  60
LESCVSMMTS PNRTQQESIA MGVSCAGIMI QEIILAASSL SCTLPQVAPS TAVAYDEPPP  120
GDMKVESATA WMDHSSNNSL GIGGKDDFFS SINPSTNSAN DVDNGSITRD QIRKVELPLD  180
RTGMRKECSQ GLSSNEYTII ELDAADLLAK YTHYCQVCGK GFRRDANLRM HMRAHGDEYK  240
TAAALANPTK SSKSSSSGVA LKYSCPHEGC RWNRKHAKFQ PLKSAVCVKN HYKRSHCPKM  300
YVCNRCNLKQ FSVLSDLRTH EKHCGDLRWR CSCGTNFSRK DKLMGHVALF VGHTPEPSCS  360
RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-100	C2H2 family protein