PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80595.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 345aa MW: 37621 Da PI: 7.8517

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74	1.8e-23	115	214	3	99
EE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 k+ltpsd+++ g +++p+ +ae + ++ + t+ + d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD+vvF+ +++ ++ +v RWV80595.1 115 KILTPSDANNGGGFSVPRFCAEMIfppldfnADPPVQ--TIWVSDVHGNLWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFM--KNKFGKIFV 209 899************9999888*96545444..8********************************************..779999* PP EEE-S CS B3 95 kvfrk 99 +v+r+ RWV80595.1 210 GVRRT 214 ***97 PP
2	Auxin_resp	75.9	1e-25	263	345	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 ++ a ++ +Fev+Y+P+a+ +eFvv e v++a++++++ GmR++m ++ eds+++++ +Gt ++v + +Wp S+Wr+L+ RWV80595.1 263 VRLAGMGLPFEVLYYPSAGFPEFVVAEEAVQAAMSKSWTSGMRVRMLLDAEDSAKTTCfQGTLSSVGMYAVEQWPPSPWRMLE 345 56677889**********************************************999********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MIGHILAHQT ELRSVDSDVW QACAGPSGRI PAVGLRACYF PQGHAEQAAS PPDFSAFPAL 60 PGVVRCRIFA VRLLANPDTD EVFSSISLDP RPAALSSSSP PEVAVRDDGF VSYPKILTPS 120 DANNGGGFSV PRFCAEMIFP PLDFNADPPV QTIWVSDVHG NLWDFRHIYR GTPRRHLLTT 180 GWSKFVNSKK LIAGDSVVFM KNKFGKIFVG VRRTSRSCGP VDHSPYIPQS ATLMTMMENF 240 SGGVGFSRNV RGRVPAASVV EAVRLAGMGL PFEVLYYPSA GFPEFVVAEE AVQAAMSKSW 300 TSGMRVRMLL DAEDSAKTTC FQGTLSSVGM YAVEQWPPSP WRMLE

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MIGHILAHQT ELRSVDSDVW QACAGPSGRI PAVGLRACYF PQGHAEQAAS PPDFSAFPAL  60
PGVVRCRIFA VRLLANPDTD EVFSSISLDP RPAALSSSSP PEVAVRDDGF VSYPKILTPS  120
DANNGGGFSV PRFCAEMIFP PLDFNADPPV QTIWVSDVHG NLWDFRHIYR GTPRRHLLTT  180
GWSKFVNSKK LIAGDSVVFM KNKFGKIFVG VRRTSRSCGP VDHSPYIPQS ATLMTMMENF  240
SGGVGFSRNV RGRVPAASVV EAVRLAGMGL PFEVLYYPSA GFPEFVVAEE AVQAAMSKSW  300
TSGMRVRMLL DAEDSAKTTC FQGTLSSVGM YAVEQWPPSP WRMLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	4e-92	ARF family protein