PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV81200.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 196aa    MW: 22298 Da    PI: 6.6357
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV81200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-1427109147
                      TSSS-HHHHHHHHHHHHHTTTT.....................................-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.....................................tWktIartmgkgRtlkqcksrwqky 47 
                      +g+WT++Ed+ll   v++ Ggg                                      W++Iar ++ gRt++++k++w+++
       RWV81200.1  27 KGPWTPQEDKLLTAHVNLRGGGrwnsvskltgnrlhrlllhfhrllllglclrieeerkEWSAIARSLP-GRTDNDIKNYWRTH 109
                      79*******************************************************************.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
VNSFGSSPAM DEGTKRGADA VEERWRKGPW TPQEDKLLTA HVNLRGGGRW NSVSKLTGNR  60
LHRLLLHFHR LLLLGLCLRI EEERKEWSAI ARSLPGRTDN DIKNYWRTHF KNSTPPSKNN  120
VENKPRAQLL TQQQDEEMRM TMNEIEQAAV AHDMQQEMAY VYPFTGMLQG GSADGSITDG  180
SSEEEVSWGG LWHLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13480.12e-28MYB family protein