PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81306.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 302aa MW: 34169.2 Da PI: 5.0466

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.3e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +++++G +W++ ++ g+ R++k+c++rw +yl RWV81306.1 16 KGTWTEEEDMKLIAYIHKYGHQNWRALPKLAGLLRCGKSCRLRWTNYL 63 799***************************99**********97 PP
2	Myb_DNA-binding	43.3	8.5e-14	69	142	1	48
TSSS-HHHHHHHHHHHHHTTTT...........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........................tWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ +++++++lG++ +W++Ia+ ++ gRt++++k+ w+++l RWV81306.1 69 RGNFTRDEEDTIIKLHALLGNKyttlplpsvtwttasccrlshlsrvalRWSKIASFLP-GRTDNEIKNVWNTHL 142 89*******************************************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGRGRAPCCE KIGLNKGTWT EEEDMKLIAY IHKYGHQNWR ALPKLAGLLR CGKSCRLRWT 60 NYLRPDIKRG NFTRDEEDTI IKLHALLGNK YTTLPLPSVT WTTASCCRLS HLSRVALRWS 120 KIASFLPGRT DNEIKNVWNT HLKKRAASGE QQPVTNFGAS TSTGDRMASA IEIPVDPAVD 180 VFGIFDDALS TLMQSNEMED SVFPETLGGR QDSPWTSSQK QSRGPVAPEG TNHPSVPDAG 240 KPEEEACEAE GTRRDGQREE WLDYLEKELG LRDDGEEWDR WDEMEGDMVD SLLRDDSFYP 300 YN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	2e-61	MYB family protein