PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81347.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 357aa MW: 38377.7 Da PI: 10.2317

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	156	177	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k Fs+ L+ H+r+H RWV81347.1 156 QCDICNKIFSSINALHGHMRSH 177 7********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKQGVLVDVV VAFEALVSYG VVVVVTRIYA DRHEATGRRH RSLPFYLSHP PPPPLLQQQH 60 REPDAPMTVT ANPEPSFHRG GLAAAGGSAG DDDGDDPSGH KRLKPNENID ANPIFPQDDD 120 EDEDEEEEEA GDHAGKKPPA PLRRPPRRPE LAGPRQCDIC NKIFSSINAL HGHMRSHPFR 180 KLHGSATPSS GKLVAGQEVA DPLLLLSGQG GAIRKRRFIC SRCNREFATR QALGGHRASH 240 KSQKGCFEKA RELREYGPRS GRRRRKRGGI NDEGPSGTKN VEAPAVTFPV TAPPAPPRPA 300 TRVERTPTTT ARRGGRKRKL DLNLLPASSD DTSGGNGNGN GNGNGNGNGS PTSGNKG

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKQGVLVDVV VAFEALVSYG VVVVVTRIYA DRHEATGRRH RSLPFYLSHP PPPPLLQQQH  60
REPDAPMTVT ANPEPSFHRG GLAAAGGSAG DDDGDDPSGH KRLKPNENID ANPIFPQDDD  120
EDEDEEEEEA GDHAGKKPPA PLRRPPRRPE LAGPRQCDIC NKIFSSINAL HGHMRSHPFR  180
KLHGSATPSS GKLVAGQEVA DPLLLLSGQG GAIRKRRFIC SRCNREFATR QALGGHRASH  240
KSQKGCFEKA RELREYGPRS GRRRRKRGGI NDEGPSGTKN VEAPAVTFPV TAPPAPPRPA  300
TRVERTPTTT ARRGGRKRKL DLNLLPASSD DTSGGNGNGN GNGNGNGNGS PTSGNKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	2e-14	C2H2 family protein